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Pretzel Documentation
Moving axes
Initializing search
About Pretzel
User Stories
Use Cases
Basic Functions
Local Setup
Pretzel Documentation
About Pretzel
About Pretzel
User Stories
User Stories
User Story 1 – Identifying virus resistant PGRs using Pretzel
User Story 2 - Filtering AGG wheat accessions for stripe rust resistance gene Yr34/Yr48
User Story 3 - From SSRs to pan genomes with Pretzel: Two decades of wheat yield QTLs on chromosome 7A
Use Cases
Use Cases
Finding a marker or gene on a genome
Visualise genotype data for a subset of accessions around specific genomic regions
Visualise the location of a subset of markers​
VCF Genotype Search
Basic Functions
Basic Functions
Adding and removing datasets from the view
Search and filter datasets
Zooming in and out of datasets
Moving axes
BLAST search
Flip orientation of axes
Feature search
Local Setup
Local Setup
Local setup
Moving axes
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Holding Ctrl, click and drag an axis to re-organise the view.
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